Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 SEC1P-202ENST00000473944 940 ntBASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 AC022616.7-201ENST00000525383 220 ntBASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 HOXB1-202ENST00000577092 1414 ntBASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NECTIN3Q9NQS3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 HTR7P1-202ENST00000624664 4411 ntBASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NECTIN3Q9NQS3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms