Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 SLC29A4P1-201ENST00000398760 971 ntBASIC15.71■□□□□ 0.11
IFT46Q9NQC8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 AC004264.1-201ENST00000608354 794 ntBASIC15.71■□□□□ 0.11
IFT46Q9NQC8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 KRT8P41-201ENST00000533985 1514 ntBASIC15.71■□□□□ 0.11
IFT46Q9NQC8 AC008556.1-201ENST00000610908 2040 ntBASIC15.71■□□□□ 0.11
IFT46Q9NQC8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
IFT46Q9NQC8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
IFT46Q9NQC8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
IFT46Q9NQC8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
IFT46Q9NQC8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 AC026185.1-201ENST00000445748 174 ntBASIC15.7■□□□□ 0.1
IFT46Q9NQC8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 AL121832.2-201ENST00000610979 668 ntBASIC15.7■□□□□ 0.1
IFT46Q9NQC8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 FLJ16779-201ENST00000612722 7638 ntBASIC15.7■□□□□ 0.1
IFT46Q9NQC8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT46Q9NQC8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 MIR4758-201ENST00000577688 71 ntBASIC15.69■□□□□ 0.1
IFT46Q9NQC8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT46Q9NQC8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms