Protein–RNA interactions for Protein: Q9HCM2

PLXNA4, Plexin-A4, humanhuman

Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4Q9HCM2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.13■□□□□ 0.65
PLXNA4Q9HCM2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.13■□□□□ 0.65
PLXNA4Q9HCM2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PLXNA4Q9HCM2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.13■□□□□ 0.65
PLXNA4Q9HCM2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PLXNA4Q9HCM2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.13■□□□□ 0.65
PLXNA4Q9HCM2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 KRT18P3-201ENST00000451602 1288 ntBASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 UNC93B6-202ENST00000528242 690 ntBASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 AP001160.2-201ENST00000596071 487 ntBASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 AC010460.3-201ENST00000511359 1579 ntBASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLXNA4Q9HCM2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 KRT8P47-201ENST00000604727 1398 ntBASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 ALG1L5P-201ENST00000482043 771 ntBASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.11■□□□□ 0.65
PLXNA4Q9HCM2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 KRT18P27-201ENST00000427733 1299 ntBASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PLXNA4Q9HCM2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PLXNA4Q9HCM2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms