Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.33■□□□□ 0.85
CBX8Q9HC52 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX8Q9HC52 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX8Q9HC52 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
CBX8Q9HC52 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX8Q9HC52 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CBX8Q9HC52 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CBX8Q9HC52 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.33■□□□□ 0.85
CBX8Q9HC52 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.33■□□□□ 0.85
CBX8Q9HC52 AC026271.3-201ENST00000571884 352 ntBASIC20.33■□□□□ 0.85
CBX8Q9HC52 CR392000.1-201ENST00000624770 1228 ntBASIC20.33■□□□□ 0.85
CBX8Q9HC52 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.33■□□□□ 0.85
CBX8Q9HC52 AL031985.4-201ENST00000642138 673 ntBASIC20.33■□□□□ 0.85
CBX8Q9HC52 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CBX8Q9HC52 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CBX8Q9HC52 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
CBX8Q9HC52 HCG11-201ENST00000411553 5696 ntBASIC20.33■□□□□ 0.84
CBX8Q9HC52 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CBX8Q9HC52 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CBX8Q9HC52 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CBX8Q9HC52 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CBX8Q9HC52 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CBX8Q9HC52 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 MIR149-201ENST00000384879 89 ntBASIC20.32■□□□□ 0.84
CBX8Q9HC52 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CBX8Q9HC52 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.32■□□□□ 0.84
CBX8Q9HC52 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CBX8Q9HC52 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CBX8Q9HC52 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CBX8Q9HC52 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CBX8Q9HC52 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CBX8Q9HC52 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CBX8Q9HC52 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.31■□□□□ 0.84
CBX8Q9HC52 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.3■□□□□ 0.84
CBX8Q9HC52 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 HLA-L-209ENST00000420110 1011 ntBASIC20.3■□□□□ 0.84
CBX8Q9HC52 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 B3GAT3P1-201ENST00000471720 806 ntBASIC20.3■□□□□ 0.84
CBX8Q9HC52 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 RNA5SP413-201ENST00000516373 109 ntBASIC20.3■□□□□ 0.84
CBX8Q9HC52 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.3■□□□□ 0.84
CBX8Q9HC52 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CBX8Q9HC52 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms