Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SP110Q9HB58 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SP110Q9HB58 MIR1224-201ENST00000408193 85 ntBASIC18.63■□□□□ 0.57
SP110Q9HB58 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.63■□□□□ 0.57
SP110Q9HB58 VENTXP5-201ENST00000523979 775 ntBASIC18.63■□□□□ 0.57
SP110Q9HB58 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.63■□□□□ 0.57
SP110Q9HB58 ZNF444P1-201ENST00000559497 298 ntBASIC18.63■□□□□ 0.57
SP110Q9HB58 AC087388.1-201ENST00000571370 1112 ntBASIC18.63■□□□□ 0.57
SP110Q9HB58 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.63■□□□□ 0.57
SP110Q9HB58 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SP110Q9HB58 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SP110Q9HB58 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SP110Q9HB58 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SP110Q9HB58 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SP110Q9HB58 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.63■□□□□ 0.57
SP110Q9HB58 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.63■□□□□ 0.57
SP110Q9HB58 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SP110Q9HB58 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SP110Q9HB58 AC093677.2-201ENST00000600169 1863 ntBASIC18.63■□□□□ 0.57
SP110Q9HB58 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SP110Q9HB58 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SP110Q9HB58 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.62■□□□□ 0.57
SP110Q9HB58 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 KRT18P48-201ENST00000434763 852 ntBASIC18.62■□□□□ 0.57
SP110Q9HB58 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.62■□□□□ 0.57
SP110Q9HB58 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.62■□□□□ 0.57
SP110Q9HB58 AC010331.1-201ENST00000611423 582 ntBASIC18.62■□□□□ 0.57
SP110Q9HB58 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.62■□□□□ 0.57
SP110Q9HB58 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SP110Q9HB58 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SP110Q9HB58 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SP110Q9HB58 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.61■□□□□ 0.57
SP110Q9HB58 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.61■□□□□ 0.57
SP110Q9HB58 NEFHP1-201ENST00000412845 2629 ntBASIC18.61■□□□□ 0.57
SP110Q9HB58 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.61■□□□□ 0.57
SP110Q9HB58 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SP110Q9HB58 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SP110Q9HB58 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 PHGDH-209ENST00000641074 1780 ntBASIC18.61■□□□□ 0.57
SP110Q9HB58 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.61■□□□□ 0.57
SP110Q9HB58 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SP110Q9HB58 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.61■□□□□ 0.57
SP110Q9HB58 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.61■□□□□ 0.57
SP110Q9HB58 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SP110Q9HB58 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SP110Q9HB58 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SP110Q9HB58 BICD1-207ENST00000551848 1962 ntBASIC18.61■□□□□ 0.57
SP110Q9HB58 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.6■□□□□ 0.57
SP110Q9HB58 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.6■□□□□ 0.57
SP110Q9HB58 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SP110Q9HB58 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.6■□□□□ 0.57
SP110Q9HB58 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.6■□□□□ 0.57
SP110Q9HB58 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.6■□□□□ 0.57
SP110Q9HB58 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.6■□□□□ 0.57
SP110Q9HB58 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms