Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.86■□□□□ 0.29
UBQLN3Q9H347 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.86■□□□□ 0.29
UBQLN3Q9H347 AC008764.6-201ENST00000595909 2069 ntBASIC16.85■□□□□ 0.29
UBQLN3Q9H347 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 HBZP1-201ENST00000354915 429 ntBASIC16.85■□□□□ 0.29
UBQLN3Q9H347 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 KRT18P41-201ENST00000518924 1277 ntBASIC16.85■□□□□ 0.29
UBQLN3Q9H347 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 MIR3180-4-201ENST00000582223 153 ntBASIC16.85■□□□□ 0.29
UBQLN3Q9H347 AC010240.3-201ENST00000607688 395 ntBASIC16.85■□□□□ 0.29
UBQLN3Q9H347 AL358472.4-201ENST00000633140 710 ntBASIC16.85■□□□□ 0.29
UBQLN3Q9H347 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 LINC01311-201ENST00000565162 1445 ntBASIC16.85■□□□□ 0.29
UBQLN3Q9H347 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBQLN3Q9H347 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBQLN3Q9H347 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms