Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.29■□□□□ 0.52
CLPBQ9H078 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.29■□□□□ 0.52
CLPBQ9H078 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLPBQ9H078 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.29■□□□□ 0.52
CLPBQ9H078 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLPBQ9H078 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.29■□□□□ 0.52
CLPBQ9H078 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLPBQ9H078 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLPBQ9H078 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.29■□□□□ 0.52
CLPBQ9H078 AC009065.1-201ENST00000564055 1225 ntBASIC18.29■□□□□ 0.52
CLPBQ9H078 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.29■□□□□ 0.52
CLPBQ9H078 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.29■□□□□ 0.52
CLPBQ9H078 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLPBQ9H078 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 NEFHP1-201ENST00000412845 2629 ntBASIC18.29■□□□□ 0.52
CLPBQ9H078 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLPBQ9H078 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.28■□□□□ 0.52
CLPBQ9H078 AL163051.1-201ENST00000569214 1512 ntBASIC18.28■□□□□ 0.52
CLPBQ9H078 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.28■□□□□ 0.52
CLPBQ9H078 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.28■□□□□ 0.52
CLPBQ9H078 ATP5G2P1-201ENST00000433580 426 ntBASIC18.28■□□□□ 0.52
CLPBQ9H078 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.28■□□□□ 0.52
CLPBQ9H078 AC104390.1-201ENST00000555663 520 ntBASIC18.28■□□□□ 0.52
CLPBQ9H078 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.28■□□□□ 0.52
CLPBQ9H078 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLPBQ9H078 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.28■□□□□ 0.52
CLPBQ9H078 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPBQ9H078 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPBQ9H078 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPBQ9H078 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPBQ9H078 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.27■□□□□ 0.52
CLPBQ9H078 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPBQ9H078 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPBQ9H078 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLPBQ9H078 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPBQ9H078 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLPBQ9H078 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.27■□□□□ 0.52
CLPBQ9H078 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
CLPBQ9H078 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPBQ9H078 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.27■□□□□ 0.52
CLPBQ9H078 HLA-F-220ENST00000434407 884 ntBASIC18.27■□□□□ 0.52
CLPBQ9H078 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CLPBQ9H078 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.27■□□□□ 0.52
CLPBQ9H078 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLPBQ9H078 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.27■□□□□ 0.52
CLPBQ9H078 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPBQ9H078 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.27■□□□□ 0.52
CLPBQ9H078 NPAP1P7-201ENST00000613027 823 ntBASIC18.27■□□□□ 0.52
CLPBQ9H078 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPBQ9H078 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CLPBQ9H078 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLPBQ9H078 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.27■□□□□ 0.52
CLPBQ9H078 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLPBQ9H078 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLPBQ9H078 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.27■□□□□ 0.51
CLPBQ9H078 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CLPBQ9H078 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLPBQ9H078 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.27■□□□□ 0.51
CLPBQ9H078 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLPBQ9H078 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CLPBQ9H078 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.26■□□□□ 0.51
CLPBQ9H078 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLPBQ9H078 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.26■□□□□ 0.51
CLPBQ9H078 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLPBQ9H078 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLPBQ9H078 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.26■□□□□ 0.51
CLPBQ9H078 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CLPBQ9H078 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms