Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 CKBP1-201ENST00000565489 1086 ntBASIC10.86□□□□□ -0.67
LIMD2Q9BT23 CD177P1-201ENST00000606252 935 ntBASIC10.86□□□□□ -0.67
LIMD2Q9BT23 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 SRI-203ENST00000419179 1307 ntTSL 2 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 AL355355.2-201ENST00000442321 338 ntBASIC10.85□□□□□ -0.67
LIMD2Q9BT23 B3GAT3P1-201ENST00000471720 806 ntBASIC10.85□□□□□ -0.67
LIMD2Q9BT23 DENND3-207ENST00000518347 850 ntTSL 2 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 HEIH-201ENST00000623091 1652 ntBASIC10.85□□□□□ -0.67
LIMD2Q9BT23 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC10.85□□□□□ -0.67
LIMD2Q9BT23 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 FAM197Y1-201ENST00000421178 764 ntBASIC10.84□□□□□ -0.67
LIMD2Q9BT23 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 AP006294.2-201ENST00000641667 209 ntBASIC10.84□□□□□ -0.67
LIMD2Q9BT23 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 AL031598.1-201ENST00000561511 1773 ntBASIC10.84□□□□□ -0.67
LIMD2Q9BT23 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms