Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 AC116407.4-201ENST00000623319 1061 ntBASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 AL358472.4-201ENST00000633140 710 ntBASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 IER3-202ENST00000376377 1350 ntBASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2Q9BSQ5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 IGHGP-201ENST00000390555 1178 ntBASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 GPR32P1-201ENST00000601788 811 ntBASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCM2Q9BSQ5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms