Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.3■□□□□ 0.36
CGREF1Q99674 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CGREF1Q99674 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.3■□□□□ 0.36
CGREF1Q99674 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.3■□□□□ 0.36
CGREF1Q99674 MIR3180-5-201ENST00000583743 153 ntBASIC17.3■□□□□ 0.36
CGREF1Q99674 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGREF1Q99674 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CGREF1Q99674 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.3■□□□□ 0.36
CGREF1Q99674 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.3■□□□□ 0.36
CGREF1Q99674 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGREF1Q99674 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGREF1Q99674 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CGREF1Q99674 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGREF1Q99674 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.3■□□□□ 0.36
CGREF1Q99674 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CGREF1Q99674 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.3■□□□□ 0.36
CGREF1Q99674 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
CGREF1Q99674 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CGREF1Q99674 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.29■□□□□ 0.36
CGREF1Q99674 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CGREF1Q99674 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CGREF1Q99674 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CGREF1Q99674 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.29■□□□□ 0.36
CGREF1Q99674 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.29■□□□□ 0.36
CGREF1Q99674 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.29■□□□□ 0.36
CGREF1Q99674 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CGREF1Q99674 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CGREF1Q99674 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.29■□□□□ 0.36
CGREF1Q99674 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CGREF1Q99674 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CGREF1Q99674 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.29■□□□□ 0.36
CGREF1Q99674 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.29■□□□□ 0.36
CGREF1Q99674 AC128676.1-201ENST00000454392 318 ntBASIC17.29■□□□□ 0.36
CGREF1Q99674 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.29■□□□□ 0.36
CGREF1Q99674 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.29■□□□□ 0.36
CGREF1Q99674 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.29■□□□□ 0.36
CGREF1Q99674 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.29■□□□□ 0.36
CGREF1Q99674 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGREF1Q99674 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CGREF1Q99674 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 AC036111.1-201ENST00000533973 1582 ntBASIC17.28■□□□□ 0.36
CGREF1Q99674 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.28■□□□□ 0.36
CGREF1Q99674 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.28■□□□□ 0.36
CGREF1Q99674 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CGREF1Q99674 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.28■□□□□ 0.36
CGREF1Q99674 MFAP1P1-201ENST00000442257 1255 ntBASIC17.28■□□□□ 0.36
CGREF1Q99674 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.28■□□□□ 0.36
CGREF1Q99674 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.28■□□□□ 0.36
CGREF1Q99674 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.28■□□□□ 0.36
CGREF1Q99674 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CGREF1Q99674 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CGREF1Q99674 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGREF1Q99674 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.28■□□□□ 0.36
CGREF1Q99674 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGREF1Q99674 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGREF1Q99674 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CGREF1Q99674 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGREF1Q99674 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CGREF1Q99674 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGREF1Q99674 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CGREF1Q99674 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.27■□□□□ 0.36
CGREF1Q99674 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGREF1Q99674 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CGREF1Q99674 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.27■□□□□ 0.36
CGREF1Q99674 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGREF1Q99674 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CGREF1Q99674 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGREF1Q99674 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGREF1Q99674 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.27■□□□□ 0.36
CGREF1Q99674 ID1-201ENST00000376105 1233 ntBASIC17.27■□□□□ 0.36
CGREF1Q99674 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms