Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 MIR6821-201ENST00000617625 74 ntBASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 MST1L-201ENST00000442552 2185 ntBASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 AL513477.1-201ENST00000602865 2407 ntBASIC17.76■□□□□ 0.43
RAB3IPQ96QF0 AL596257.1-201ENST00000641463 2694 ntBASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 KRT18P55-202ENST00000578578 1546 ntBASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 PCDHA14-201ENST00000506751 2298 ntBASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IPQ96QF0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 AL355472.2-201ENST00000422958 438 ntBASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 CROCCP2-202ENST00000412962 2773 ntBASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 KRT8P32-201ENST00000512863 1461 ntBASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB3IPQ96QF0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms