Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.34■□□□□ 0.37
ITCHQ96J02 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.34■□□□□ 0.37
ITCHQ96J02 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.34■□□□□ 0.37
ITCHQ96J02 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ITCHQ96J02 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.34■□□□□ 0.37
ITCHQ96J02 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.34■□□□□ 0.37
ITCHQ96J02 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 CRYGFP-201ENST00000418459 633 ntBASIC17.34■□□□□ 0.37
ITCHQ96J02 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
ITCHQ96J02 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ITCHQ96J02 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.34■□□□□ 0.37
ITCHQ96J02 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.34■□□□□ 0.37
ITCHQ96J02 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ITCHQ96J02 HOXB1-202ENST00000577092 1414 ntBASIC17.34■□□□□ 0.37
ITCHQ96J02 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.34■□□□□ 0.37
ITCHQ96J02 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.34■□□□□ 0.37
ITCHQ96J02 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.34■□□□□ 0.37
ITCHQ96J02 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.34■□□□□ 0.37
ITCHQ96J02 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ITCHQ96J02 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ITCHQ96J02 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ITCHQ96J02 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
ITCHQ96J02 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
ITCHQ96J02 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ITCHQ96J02 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
ITCHQ96J02 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
ITCHQ96J02 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ITCHQ96J02 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.33■□□□□ 0.37
ITCHQ96J02 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ITCHQ96J02 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.33■□□□□ 0.37
ITCHQ96J02 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.33■□□□□ 0.37
ITCHQ96J02 KRT8P7-201ENST00000533003 1432 ntBASIC17.33■□□□□ 0.36
ITCHQ96J02 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ITCHQ96J02 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.33■□□□□ 0.36
ITCHQ96J02 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.33■□□□□ 0.36
ITCHQ96J02 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ITCHQ96J02 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.33■□□□□ 0.36
ITCHQ96J02 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ITCHQ96J02 MIR4674-201ENST00000582457 87 ntBASIC17.33■□□□□ 0.36
ITCHQ96J02 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.33■□□□□ 0.36
ITCHQ96J02 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.33■□□□□ 0.36
ITCHQ96J02 AC099343.3-201ENST00000605834 2503 ntBASIC17.33■□□□□ 0.36
ITCHQ96J02 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ITCHQ96J02 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ITCHQ96J02 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.33■□□□□ 0.36
ITCHQ96J02 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.33■□□□□ 0.36
ITCHQ96J02 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
ITCHQ96J02 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
ITCHQ96J02 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ITCHQ96J02 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ITCHQ96J02 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ITCHQ96J02 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ITCHQ96J02 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ITCHQ96J02 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
ITCHQ96J02 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.32■□□□□ 0.36
ITCHQ96J02 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
ITCHQ96J02 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.32■□□□□ 0.36
ITCHQ96J02 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 KRT18P29-201ENST00000397031 1267 ntBASIC17.32■□□□□ 0.36
ITCHQ96J02 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.32■□□□□ 0.36
ITCHQ96J02 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.32■□□□□ 0.36
ITCHQ96J02 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.32■□□□□ 0.36
ITCHQ96J02 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.32■□□□□ 0.36
ITCHQ96J02 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.32■□□□□ 0.36
ITCHQ96J02 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.32■□□□□ 0.36
ITCHQ96J02 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
ITCHQ96J02 AP001412.1-201ENST00000608405 714 ntBASIC17.32■□□□□ 0.36
ITCHQ96J02 ITM2C-210ENST00000620962 501 ntBASIC17.32■□□□□ 0.36
ITCHQ96J02 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.32■□□□□ 0.36
ITCHQ96J02 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ITCHQ96J02 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
ITCHQ96J02 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.32■□□□□ 0.36
ITCHQ96J02 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.32■□□□□ 0.36
ITCHQ96J02 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ITCHQ96J02 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms