Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CHMP6Q96FZ7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP6Q96FZ7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP6Q96FZ7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.33■□□□□ 0.53
CHMP6Q96FZ7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP6Q96FZ7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CHMP6Q96FZ7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP6Q96FZ7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CHMP6Q96FZ7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP6Q96FZ7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 AL160286.2-201ENST00000567150 934 ntBASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 AC060766.5-201ENST00000590539 871 ntBASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 AC083880.1-201ENST00000608266 535 ntBASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 MYC-209ENST00000641252 345 ntBASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP6Q96FZ7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP6Q96FZ7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 SOX15-203ENST00000570788 1093 ntBASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 PHGDH-209ENST00000641074 1780 ntBASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHMP6Q96FZ7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
CHMP6Q96FZ7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms