Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 AC090164.3-201ENST00000610780 2143 ntBASIC18.74■□□□□ 0.59
IFT43Q96FT9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
IFT43Q96FT9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IFT43Q96FT9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IFT43Q96FT9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IFT43Q96FT9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IFT43Q96FT9 UPK3BP1-201ENST00000428678 509 ntBASIC18.74■□□□□ 0.59
IFT43Q96FT9 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.74■□□□□ 0.59
IFT43Q96FT9 AC009947.2-201ENST00000444014 672 ntBASIC18.74■□□□□ 0.59
IFT43Q96FT9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 AC112497.1-201ENST00000624824 639 ntBASIC18.74■□□□□ 0.59
IFT43Q96FT9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IFT43Q96FT9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IFT43Q96FT9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IFT43Q96FT9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 HOXB1-202ENST00000577092 1414 ntBASIC18.74■□□□□ 0.59
IFT43Q96FT9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 AC073592.3-201ENST00000625118 1834 ntBASIC18.73■□□□□ 0.59
IFT43Q96FT9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 AL023973.1-201ENST00000624619 620 ntBASIC18.73■□□□□ 0.59
IFT43Q96FT9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFT43Q96FT9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
IFT43Q96FT9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 AL671277.2-201ENST00000458060 996 ntBASIC18.72■□□□□ 0.59
IFT43Q96FT9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 FAM86EP-206ENST00000510506 987 ntBASIC18.72■□□□□ 0.59
IFT43Q96FT9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 KRT8P50-201ENST00000562022 1438 ntBASIC18.72■□□□□ 0.59
IFT43Q96FT9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
IFT43Q96FT9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IFT43Q96FT9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
IFT43Q96FT9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IFT43Q96FT9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms