Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIPA1Q96FS4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 AL590627.1-203ENST00000421194 1026 ntBASIC18.19■□□□□ 0.5
SIPA1Q96FS4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 AC009533.2-201ENST00000543664 586 ntBASIC18.19■□□□□ 0.5
SIPA1Q96FS4 AP001005.1-201ENST00000571755 1248 ntBASIC18.19■□□□□ 0.5
SIPA1Q96FS4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 AC008608.2-201ENST00000606089 416 ntBASIC18.19■□□□□ 0.5
SIPA1Q96FS4 AC120114.3-201ENST00000611923 658 ntBASIC18.19■□□□□ 0.5
SIPA1Q96FS4 AL773604.1-201ENST00000617417 272 ntBASIC18.19■□□□□ 0.5
SIPA1Q96FS4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 LINC01126-201ENST00000623515 1646 ntBASIC18.19■□□□□ 0.5
SIPA1Q96FS4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIPA1Q96FS4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 BX640515.1-201ENST00000617215 977 ntBASIC18.18■□□□□ 0.5
SIPA1Q96FS4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SIPA1Q96FS4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 AF186996.4-201ENST00000467186 377 ntBASIC18.17■□□□□ 0.5
SIPA1Q96FS4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.17■□□□□ 0.5
SIPA1Q96FS4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms