Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC23.33■■□□□ 1.33
ZNF428Q96B54 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZNF428Q96B54 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
ZNF428Q96B54 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZNF428Q96B54 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZNF428Q96B54 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC23.33■■□□□ 1.33
ZNF428Q96B54 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC23.33■■□□□ 1.33
ZNF428Q96B54 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZNF428Q96B54 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
ZNF428Q96B54 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ZNF428Q96B54 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZNF428Q96B54 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZNF428Q96B54 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZNF428Q96B54 TPM4P1-201ENST00000436100 807 ntBASIC23.33■■□□□ 1.33
ZNF428Q96B54 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.33■■□□□ 1.33
ZNF428Q96B54 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC23.33■■□□□ 1.33
ZNF428Q96B54 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC23.33■■□□□ 1.33
ZNF428Q96B54 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.33■■□□□ 1.33
ZNF428Q96B54 MIR3652-201ENST00000579335 131 ntBASIC23.33■■□□□ 1.33
ZNF428Q96B54 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.33■■□□□ 1.33
ZNF428Q96B54 VPS72-207ENST00000640458 689 ntTSL 5 BASIC23.33■■□□□ 1.33
ZNF428Q96B54 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
ZNF428Q96B54 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ZNF428Q96B54 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ZNF428Q96B54 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ZNF428Q96B54 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 AC138028.4-201ENST00000564984 1845 ntBASIC23.32■■□□□ 1.32
ZNF428Q96B54 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 IGHGP-201ENST00000390555 1178 ntBASIC23.32■■□□□ 1.32
ZNF428Q96B54 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 PRELID1P1-202ENST00000567272 903 ntBASIC23.32■■□□□ 1.32
ZNF428Q96B54 AC005332.3-201ENST00000589904 676 ntBASIC23.32■■□□□ 1.32
ZNF428Q96B54 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC23.32■■□□□ 1.32
ZNF428Q96B54 AC132938.6-201ENST00000623828 1655 ntBASIC23.32■■□□□ 1.32
ZNF428Q96B54 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF428Q96B54 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 AP000867.3-201ENST00000524675 377 ntBASIC23.31■■□□□ 1.32
ZNF428Q96B54 KRT8P26-201ENST00000534154 1276 ntBASIC23.31■■□□□ 1.32
ZNF428Q96B54 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 AL732292.2-201ENST00000609649 430 ntBASIC23.31■■□□□ 1.32
ZNF428Q96B54 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
ZNF428Q96B54 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF428Q96B54 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms