Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
APH1BQ8WW43 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
APH1BQ8WW43 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
APH1BQ8WW43 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.45■□□□□ 0.22
APH1BQ8WW43 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.45■□□□□ 0.22
APH1BQ8WW43 AL139384.1-201ENST00000612143 3047 ntBASIC16.45■□□□□ 0.22
APH1BQ8WW43 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APH1BQ8WW43 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 AC009102.3-201ENST00000623118 1491 ntBASIC16.44■□□□□ 0.22
APH1BQ8WW43 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 AL023284.2-201ENST00000405850 579 ntBASIC16.44■□□□□ 0.22
APH1BQ8WW43 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 AC004951.3-201ENST00000418645 1148 ntBASIC16.44■□□□□ 0.22
APH1BQ8WW43 NCF1B-203ENST00000435988 1254 ntBASIC16.44■□□□□ 0.22
APH1BQ8WW43 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 AC008040.2-201ENST00000461049 708 ntBASIC16.44■□□□□ 0.22
APH1BQ8WW43 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 AL138781.1-201ENST00000566567 1274 ntBASIC16.44■□□□□ 0.22
APH1BQ8WW43 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 AC008403.3-201ENST00000598924 454 ntBASIC16.44■□□□□ 0.22
APH1BQ8WW43 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.44■□□□□ 0.22
APH1BQ8WW43 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 LINC01126-201ENST00000623515 1646 ntBASIC16.44■□□□□ 0.22
APH1BQ8WW43 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
APH1BQ8WW43 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1BQ8WW43 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
APH1BQ8WW43 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
APH1BQ8WW43 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
APH1BQ8WW43 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
APH1BQ8WW43 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 KRT16P5-201ENST00000455284 522 ntBASIC16.43■□□□□ 0.22
APH1BQ8WW43 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
APH1BQ8WW43 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.43■□□□□ 0.22
APH1BQ8WW43 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.43■□□□□ 0.22
APH1BQ8WW43 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms