Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 LINC00602-201ENST00000629776 2065 ntBASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 AC116562.2-201ENST00000507042 360 ntBASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 AP001094.4-201ENST00000579008 2176 ntBASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 FZD10-202ENST00000539839 3282 ntBASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPS4Y2Q8TD47 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 AC099343.3-201ENST00000605834 2503 ntBASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPS4Y2Q8TD47 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 AC133963.1-201ENST00000504166 1679 ntBASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPS4Y2Q8TD47 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms