Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 AL138781.2-201ENST00000617896 1843 ntBASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 SLC25A6P4-201ENST00000586535 553 ntBASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 AL121912.1-201ENST00000603683 238 ntBASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 AC009102.3-201ENST00000623118 1491 ntBASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.07■□□□□ 0.64
SHKBP1Q8TBC3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 CROCCP3-202ENST00000420820 1947 ntBASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 MINOS1P3-201ENST00000457048 203 ntBASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 AC009113.1-201ENST00000570267 2443 ntBASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.06■□□□□ 0.64
SHKBP1Q8TBC3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 AC106795.1-205ENST00000512851 1056 ntBASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHKBP1Q8TBC3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 MRPL3P1-201ENST00000400109 1033 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms