Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 TSSC2-201ENST00000450217 709 ntBASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 AL121894.2-201ENST00000602977 491 ntBASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.47■□□□□ 0.07
CLDND2Q8NHS1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 AL450487.1-201ENST00000426799 995 ntBASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 AC012313.10-201ENST00000623509 926 ntBASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 AC016734.2-201ENST00000624325 1377 ntBASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CLDND2Q8NHS1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLDND2Q8NHS1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.46■□□□□ 0.06
CLDND2Q8NHS1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
CLDND2Q8NHS1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 AC093525.10-201ENST00000625130 1569 ntBASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 MIR662-201ENST00000384847 95 ntBASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 AC092329.2-201ENST00000598402 547 ntBASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 AC068587.9-201ENST00000641814 219 ntBASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDND2Q8NHS1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms