Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.52■□□□□ 0.72
BEST2Q8NFU1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BEST2Q8NFU1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.52■□□□□ 0.72
BEST2Q8NFU1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BEST2Q8NFU1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BEST2Q8NFU1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
BEST2Q8NFU1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.52■□□□□ 0.71
BEST2Q8NFU1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.52■□□□□ 0.71
BEST2Q8NFU1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BEST2Q8NFU1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
BEST2Q8NFU1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BEST2Q8NFU1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
BEST2Q8NFU1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.52■□□□□ 0.71
BEST2Q8NFU1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 Z69720.1-201ENST00000601483 472 ntBASIC19.51■□□□□ 0.71
BEST2Q8NFU1 AL121894.2-201ENST00000602977 491 ntBASIC19.51■□□□□ 0.71
BEST2Q8NFU1 AC233702.3-201ENST00000578656 1387 ntBASIC19.51■□□□□ 0.71
BEST2Q8NFU1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BEST2Q8NFU1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 KRT18P65-201ENST00000439811 1286 ntBASIC19.5■□□□□ 0.71
BEST2Q8NFU1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 AC012615.1-201ENST00000565797 1299 ntBASIC19.5■□□□□ 0.71
BEST2Q8NFU1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.5■□□□□ 0.71
BEST2Q8NFU1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BEST2Q8NFU1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 PHGDH-209ENST00000641074 1780 ntBASIC19.49■□□□□ 0.71
BEST2Q8NFU1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 AC246785.2-201ENST00000432512 513 ntBASIC19.49■□□□□ 0.71
BEST2Q8NFU1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 AC104819.1-201ENST00000504587 486 ntBASIC19.49■□□□□ 0.71
BEST2Q8NFU1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST2Q8NFU1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST2Q8NFU1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST2Q8NFU1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
BEST2Q8NFU1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BEST2Q8NFU1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST2Q8NFU1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST2Q8NFU1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
BEST2Q8NFU1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST2Q8NFU1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms