Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 AC023274.1-201ENST00000418278 595 ntBASIC14.2□□□□□ -0.14
C3orf56Q8N813 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 SART3-203ENST00000546611 1184 ntBASIC14.2□□□□□ -0.14
C3orf56Q8N813 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 AC008735.5-201ENST00000623544 497 ntBASIC14.2□□□□□ -0.14
C3orf56Q8N813 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
C3orf56Q8N813 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C3orf56Q8N813 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 CYMP-203ENST00000474680 1263 ntBASIC14.19□□□□□ -0.14
C3orf56Q8N813 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 AC105339.3-201ENST00000560043 636 ntBASIC14.19□□□□□ -0.14
C3orf56Q8N813 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
C3orf56Q8N813 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.19□□□□□ -0.14
C3orf56Q8N813 KRT8P32-201ENST00000512863 1461 ntBASIC14.18□□□□□ -0.14
C3orf56Q8N813 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C3orf56Q8N813 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C3orf56Q8N813 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C3orf56Q8N813 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C3orf56Q8N813 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
C3orf56Q8N813 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C3orf56Q8N813 AL020996.1-203ENST00000536896 2307 ntBASIC14.18□□□□□ -0.14
C3orf56Q8N813 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C3orf56Q8N813 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C3orf56Q8N813 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.18□□□□□ -0.14
C3orf56Q8N813 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.18□□□□□ -0.14
C3orf56Q8N813 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.18□□□□□ -0.14
C3orf56Q8N813 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.18□□□□□ -0.14
C3orf56Q8N813 FAM8A3P-201ENST00000427218 844 ntBASIC14.18□□□□□ -0.14
C3orf56Q8N813 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.18□□□□□ -0.14
C3orf56Q8N813 ABCD1P5-201ENST00000445663 754 ntBASIC14.18□□□□□ -0.14
C3orf56Q8N813 UNC93B6-202ENST00000528242 690 ntBASIC14.18□□□□□ -0.14
C3orf56Q8N813 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.18□□□□□ -0.14
C3orf56Q8N813 AC012640.2-201ENST00000561606 901 ntBASIC14.18□□□□□ -0.14
C3orf56Q8N813 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
C3orf56Q8N813 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.18□□□□□ -0.14
C3orf56Q8N813 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.18□□□□□ -0.14
C3orf56Q8N813 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.18□□□□□ -0.14
C3orf56Q8N813 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C3orf56Q8N813 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms