Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 IGHV3-41-201ENST00000613121 348 ntBASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 RNF165-205ENST00000588679 2904 ntBASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAM1L1Q8N609 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 ATP5G2P1-201ENST00000433580 426 ntBASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 RN7SL606P-201ENST00000472779 293 ntBASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 DUTP2-201ENST00000519164 463 ntBASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 AL592071.1-201ENST00000611956 408 ntBASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 AC093458.2-201ENST00000623150 629 ntBASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAM1L1Q8N609 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 ABALON-201ENST00000629058 1903 ntBASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 AP002383.4-201ENST00000442518 975 ntBASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 NPAP1P7-201ENST00000613027 823 ntBASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.92■□□□□ 0.46
TRAM1L1Q8N609 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms