Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AP000523.1-201ENST00000398242 1049 ntBASIC22.51■■□□□ 1.19
SMC5Q8IY18 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SMC5Q8IY18 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.51■■□□□ 1.19
SMC5Q8IY18 AC012306.2-201ENST00000609350 630 ntBASIC22.51■■□□□ 1.19
SMC5Q8IY18 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.51■■□□□ 1.19
SMC5Q8IY18 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC22.51■■□□□ 1.19
SMC5Q8IY18 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.51■■□□□ 1.19
SMC5Q8IY18 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC22.51■■□□□ 1.19
SMC5Q8IY18 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SMC5Q8IY18 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 SLC25A3P1-201ENST00000443844 931 ntBASIC22.5■■□□□ 1.19
SMC5Q8IY18 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 PODN-203ENST00000395871 2744 ntTSL 5 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.5■■□□□ 1.19
SMC5Q8IY18 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC5Q8IY18 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SMC5Q8IY18 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SMC5Q8IY18 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
SMC5Q8IY18 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.49■■□□□ 1.19
SMC5Q8IY18 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.49■■□□□ 1.19
SMC5Q8IY18 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SMC5Q8IY18 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.49■■□□□ 1.19
SMC5Q8IY18 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.49■■□□□ 1.19
SMC5Q8IY18 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SMC5Q8IY18 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMC5Q8IY18 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMC5Q8IY18 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMC5Q8IY18 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC22.49■■□□□ 1.19
SMC5Q8IY18 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMC5Q8IY18 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMC5Q8IY18 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMC5Q8IY18 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SMC5Q8IY18 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.49■■□□□ 1.19
SMC5Q8IY18 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
SMC5Q8IY18 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SMC5Q8IY18 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.48■■□□□ 1.19
SMC5Q8IY18 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SMC5Q8IY18 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.48■■□□□ 1.19
SMC5Q8IY18 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SMC5Q8IY18 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SMC5Q8IY18 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SMC5Q8IY18 AC113404.2-201ENST00000507884 177 ntBASIC22.48■■□□□ 1.19
SMC5Q8IY18 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SMC5Q8IY18 AC010203.1-204ENST00000548782 407 ntBASIC22.48■■□□□ 1.19
SMC5Q8IY18 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.48■■□□□ 1.19
SMC5Q8IY18 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.48■■□□□ 1.19
SMC5Q8IY18 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.48■■□□□ 1.19
SMC5Q8IY18 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SMC5Q8IY18 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SMC5Q8IY18 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SMC5Q8IY18 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.48■■□□□ 1.19
SMC5Q8IY18 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SMC5Q8IY18 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SMC5Q8IY18 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.48■■□□□ 1.19
SMC5Q8IY18 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SMC5Q8IY18 FST-202ENST00000396947 2538 ntTSL 5 BASIC22.48■■□□□ 1.19
SMC5Q8IY18 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
SMC5Q8IY18 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
SMC5Q8IY18 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SMC5Q8IY18 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SMC5Q8IY18 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SMC5Q8IY18 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.47■■□□□ 1.19
SMC5Q8IY18 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SMC5Q8IY18 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SMC5Q8IY18 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SMC5Q8IY18 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.47■■□□□ 1.19
SMC5Q8IY18 AC079602.3-201ENST00000623931 403 ntBASIC22.47■■□□□ 1.19
SMC5Q8IY18 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SMC5Q8IY18 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
SMC5Q8IY18 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.47■■□□□ 1.19
SMC5Q8IY18 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.47■■□□□ 1.19
SMC5Q8IY18 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms