Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 AC110285.5-201ENST00000611501 352 ntBASIC18.81■□□□□ 0.6
CCDC25Q86WR0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC25Q86WR0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 KSR1P1-201ENST00000446298 240 ntBASIC18.8■□□□□ 0.6
CCDC25Q86WR0 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 AC008040.2-201ENST00000461049 708 ntBASIC18.8■□□□□ 0.6
CCDC25Q86WR0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC25Q86WR0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 FAM207BP-201ENST00000447172 505 ntBASIC18.79■□□□□ 0.6
CCDC25Q86WR0 CR392000.1-201ENST00000624770 1228 ntBASIC18.79■□□□□ 0.6
CCDC25Q86WR0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 KRT16P1-201ENST00000399124 1418 ntBASIC18.79■□□□□ 0.6
CCDC25Q86WR0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.79■□□□□ 0.6
CCDC25Q86WR0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC25Q86WR0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 AP000593.1-201ENST00000393668 712 ntBASIC18.78■□□□□ 0.6
CCDC25Q86WR0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 AC008622.2-201ENST00000617006 1229 ntBASIC18.78■□□□□ 0.6
CCDC25Q86WR0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 PP12613-201ENST00000424958 2230 ntBASIC18.78■□□□□ 0.6
CCDC25Q86WR0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC25Q86WR0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms