Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYVN1Q86TM6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SYVN1Q86TM6 AC138028.4-201ENST00000564984 1845 ntBASIC17.9■□□□□ 0.46
SYVN1Q86TM6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYVN1Q86TM6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.9■□□□□ 0.46
SYVN1Q86TM6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYVN1Q86TM6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYVN1Q86TM6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.9■□□□□ 0.46
SYVN1Q86TM6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYVN1Q86TM6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SYVN1Q86TM6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.89■□□□□ 0.46
SYVN1Q86TM6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 AL441883.1-201ENST00000566170 1045 ntBASIC17.89■□□□□ 0.45
SYVN1Q86TM6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SYVN1Q86TM6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 AC036111.1-201ENST00000533973 1582 ntBASIC17.88■□□□□ 0.45
SYVN1Q86TM6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 AL671277.2-201ENST00000458060 996 ntBASIC17.88■□□□□ 0.45
SYVN1Q86TM6 AL359075.1-203ENST00000462729 1002 ntBASIC17.88■□□□□ 0.45
SYVN1Q86TM6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 NEK4P2-201ENST00000580004 1012 ntBASIC17.88■□□□□ 0.45
SYVN1Q86TM6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYVN1Q86TM6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYVN1Q86TM6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms