Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 AC073912.3-201ENST00000624414 853 ntBASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 NAPSB-206ENST00000562112 1266 ntBASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 HEIH-201ENST00000623091 1652 ntBASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 MTMR9LP-203ENST00000426597 1545 ntBASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF111Q6ZNA4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 HCG11-201ENST00000411553 5696 ntBASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RNF111Q6ZNA4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 KRT8P9-201ENST00000558927 1449 ntBASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF111Q6ZNA4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms