Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 AC137761.2-201ENST00000561729 223 ntBASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 AC145350.3-201ENST00000569033 163 ntBASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 UBALD1-205ENST00000590891 2641 ntBASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP4Q6PIL6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 PCDHB19P-201ENST00000570871 2371 ntBASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 PCDH8P1-201ENST00000428983 2773 ntBASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 AC023632.3-201ENST00000521633 145 ntBASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.11□□□□□ -0.15
KCNIP4Q6PIL6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 DOC2GP-204ENST00000639052 2548 ntBASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
KCNIP4Q6PIL6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms