Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 AC009102.3-201ENST00000623118 1491 ntBASIC18.58■□□□□ 0.56
CASC4Q6P4E1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASC4Q6P4E1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 MIR1238-201ENST00000408483 83 ntBASIC18.57■□□□□ 0.56
CASC4Q6P4E1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 AL353719.1-201ENST00000566847 864 ntBASIC18.57■□□□□ 0.56
CASC4Q6P4E1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 AL023803.3-201ENST00000615559 522 ntBASIC18.57■□□□□ 0.56
CASC4Q6P4E1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.57■□□□□ 0.56
CASC4Q6P4E1 CROCCP1-201ENST00000426910 5675 ntBASIC18.56■□□□□ 0.56
CASC4Q6P4E1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 PHGDH-209ENST00000641074 1780 ntBASIC18.56■□□□□ 0.56
CASC4Q6P4E1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.56■□□□□ 0.56
CASC4Q6P4E1 AC134043.2-201ENST00000624206 2238 ntBASIC18.55■□□□□ 0.56
CASC4Q6P4E1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 MIR149-201ENST00000384879 89 ntBASIC18.55■□□□□ 0.56
CASC4Q6P4E1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 SNORA78-201ENST00000459373 127 ntBASIC18.55■□□□□ 0.56
CASC4Q6P4E1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 BX088651.1-201ENST00000540551 451 ntBASIC18.55■□□□□ 0.56
CASC4Q6P4E1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms