Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 AC090616.6-201ENST00000582640 721 ntBASIC16.42■□□□□ 0.22
RTL6Q6ICC9 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 IGHV3-41-201ENST00000613121 348 ntBASIC16.42■□□□□ 0.22
RTL6Q6ICC9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 OR6D1P-202ENST00000641007 5290 ntBASIC16.41■□□□□ 0.22
RTL6Q6ICC9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 TSPY19P-201ENST00000418461 509 ntBASIC16.41■□□□□ 0.22
RTL6Q6ICC9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 TSPY18P-201ENST00000441642 509 ntBASIC16.41■□□□□ 0.22
RTL6Q6ICC9 KRT18P41-201ENST00000518924 1277 ntBASIC16.41■□□□□ 0.22
RTL6Q6ICC9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 AC012615.1-201ENST00000565797 1299 ntBASIC16.41■□□□□ 0.22
RTL6Q6ICC9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 AL732292.2-201ENST00000609649 430 ntBASIC16.41■□□□□ 0.22
RTL6Q6ICC9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTL6Q6ICC9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RTL6Q6ICC9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
RTL6Q6ICC9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms