Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 AP002414.3-201ENST00000589352 1468 ntBASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 AL161938.1-201ENST00000569833 2180 ntBASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 AC093484.2-201ENST00000580996 2166 ntBASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 LAGE3P1-201ENST00000425356 484 ntBASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 AC112482.1-201ENST00000492080 688 ntBASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 AC007952.6-201ENST00000573168 2673 ntBASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 AC003957.1-201ENST00000625108 2673 ntBASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD4Q5XG99 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 AC007967.2-201ENST00000432613 625 ntBASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 AC002347.1-201ENST00000569543 541 ntBASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 LINC01126-201ENST00000623515 1646 ntBASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
LYSMD4Q5XG99 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 HMGN1P19-201ENST00000436976 333 ntBASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 AL355385.1-201ENST00000606123 409 ntBASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD4Q5XG99 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.77■□□□□ 0.43
LYSMD4Q5XG99 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.77■□□□□ 0.43
LYSMD4Q5XG99 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD4Q5XG99 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD4Q5XG99 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD4Q5XG99 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
LYSMD4Q5XG99 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms