Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RNA5SP416-201ENST00000516838 111 ntBASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 AC002347.1-201ENST00000569543 541 ntBASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 AC122714.2-201ENST00000502787 707 ntBASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 AC004967.1-201ENST00000453589 447 ntBASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 DHDH-204ENST00000523250 634 ntTSL 5 BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 CIPC-205ENST00000555437 566 ntTSL 3 BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
CDC42BPAQ5VT25 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 PMP22-202ENST00000395936 816 ntTSL 3 BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 KLF4P1-201ENST00000412782 1185 ntBASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 MSRA-206ENST00000521209 814 ntTSL 3 BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 GGCT-205ENST00000409436 954 ntTSL 3 BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 DNAJB3-202ENST00000449667 1266 ntBASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC27.36■■□□□ 1.97
CDC42BPAQ5VT25 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CDC42BPAQ5VT25 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC27.35■■□□□ 1.97
CDC42BPAQ5VT25 SRP19-202ENST00000445150 833 ntTSL 2 BASIC27.35■■□□□ 1.97
CDC42BPAQ5VT25 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC27.35■■□□□ 1.97
CDC42BPAQ5VT25 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC27.35■■□□□ 1.97
CDC42BPAQ5VT25 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CDC42BPAQ5VT25 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
CDC42BPAQ5VT25 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CDC42BPAQ5VT25 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CDC42BPAQ5VT25 GMCL1P1-201ENST00000463439 1581 ntBASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 DNAJB3-201ENST00000446806 729 ntBASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDC42BPAQ5VT25 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 AC116562.4-201ENST00000641316 2276 ntBASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CDC42BPAQ5VT25 BEX3-201ENST00000361298 921 ntTSL 2 BASIC27.33■■□□□ 1.96
CDC42BPAQ5VT25 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC27.33■■□□□ 1.96
CDC42BPAQ5VT25 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC27.33■■□□□ 1.96
CDC42BPAQ5VT25 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
CDC42BPAQ5VT25 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC27.33■■□□□ 1.96
CDC42BPAQ5VT25 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC27.33■■□□□ 1.96
CDC42BPAQ5VT25 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.96
CDC42BPAQ5VT25 AC006557.2-201ENST00000592985 1240 ntBASIC27.33■■□□□ 1.96
CDC42BPAQ5VT25 AL139424.1-201ENST00000607572 797 ntBASIC27.33■■□□□ 1.96
CDC42BPAQ5VT25 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms