Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 FAM207BP-201ENST00000447172 505 ntBASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 AC008622.2-201ENST00000617006 1229 ntBASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 AC084018.2-201ENST00000613093 2607 ntBASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00242Q5T6M2 SDHAP2-201ENST00000455183 2001 ntBASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 AL023284.2-201ENST00000405850 579 ntBASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 MCCD1P1-208ENST00000445732 328 ntBASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 AC008040.2-201ENST00000461049 708 ntBASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 AC026366.1-201ENST00000488803 879 ntBASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 AC026271.3-201ENST00000571884 352 ntBASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 AC124016.1-201ENST00000609552 612 ntBASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 AC110285.5-201ENST00000611501 352 ntBASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 AC130371.2-201ENST00000619443 611 ntBASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00242Q5T6M2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 AC093010.1-201ENST00000473625 1624 ntBASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms