Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 AC134043.2-201ENST00000624206 2238 ntBASIC20.69■□□□□ 0.9
LONRF3Q496Y0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 AL031133.1-201ENST00000406807 723 ntBASIC20.69■□□□□ 0.9
LONRF3Q496Y0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 LINC01238-205ENST00000567549 1107 ntBASIC20.69■□□□□ 0.9
LONRF3Q496Y0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LONRF3Q496Y0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 AP000997.3-201ENST00000623333 2250 ntBASIC20.68■□□□□ 0.9
LONRF3Q496Y0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 FAM8A6P-201ENST00000407496 1135 ntBASIC20.68■□□□□ 0.9
LONRF3Q496Y0 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.68■□□□□ 0.9
LONRF3Q496Y0 AC009947.2-201ENST00000444014 672 ntBASIC20.68■□□□□ 0.9
LONRF3Q496Y0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 HOXB1-202ENST00000577092 1414 ntBASIC20.68■□□□□ 0.9
LONRF3Q496Y0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.68■□□□□ 0.9
LONRF3Q496Y0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.67■□□□□ 0.9
LONRF3Q496Y0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms