Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 AC111152.3-201ENST00000569699 673 ntBASIC20.77■□□□□ 0.92
CHMP4BP1P59074 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 Z83836.1-201ENST00000624605 1642 ntBASIC20.77■□□□□ 0.92
CHMP4BP1P59074 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP4BP1P59074 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.77■□□□□ 0.91
CHMP4BP1P59074 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
CHMP4BP1P59074 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHMP4BP1P59074 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.77■□□□□ 0.91
CHMP4BP1P59074 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHMP4BP1P59074 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.77■□□□□ 0.91
CHMP4BP1P59074 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CHMP4BP1P59074 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHMP4BP1P59074 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 AL732292.2-201ENST00000609649 430 ntBASIC20.76■□□□□ 0.91
CHMP4BP1P59074 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP4BP1P59074 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 AC004870.1-201ENST00000315132 882 ntBASIC20.75■□□□□ 0.91
CHMP4BP1P59074 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 MIR662-201ENST00000384847 95 ntBASIC20.75■□□□□ 0.91
CHMP4BP1P59074 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP4BP1P59074 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.74■□□□□ 0.91
CHMP4BP1P59074 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP4BP1P59074 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMP4BP1P59074 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CHMP4BP1P59074 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.74■□□□□ 0.91
CHMP4BP1P59074 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms