Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXG1P55316 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.93■□□□□ 0.14
FOXG1P55316 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.93■□□□□ 0.14
FOXG1P55316 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXG1P55316 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
FOXG1P55316 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXG1P55316 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXG1P55316 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXG1P55316 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 KRT18P1-202ENST00000452408 1331 ntBASIC15.93■□□□□ 0.14
FOXG1P55316 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXG1P55316 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXG1P55316 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
FOXG1P55316 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXG1P55316 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
FOXG1P55316 RN7SL606P-201ENST00000472779 293 ntBASIC15.92■□□□□ 0.14
FOXG1P55316 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.92■□□□□ 0.14
FOXG1P55316 IGHV3-41-201ENST00000613121 348 ntBASIC15.92■□□□□ 0.14
FOXG1P55316 AC124864.1-201ENST00000623408 392 ntBASIC15.92■□□□□ 0.14
FOXG1P55316 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
FOXG1P55316 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXG1P55316 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXG1P55316 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.92■□□□□ 0.14
FOXG1P55316 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
FOXG1P55316 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXG1P55316 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
FOXG1P55316 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXG1P55316 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
FOXG1P55316 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.91■□□□□ 0.14
FOXG1P55316 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
FOXG1P55316 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.91■□□□□ 0.14
FOXG1P55316 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 REXO1L9P-201ENST00000604264 2108 ntBASIC15.91■□□□□ 0.14
FOXG1P55316 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
FOXG1P55316 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
FOXG1P55316 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 AL845331.1-201ENST00000424978 1190 ntBASIC15.91■□□□□ 0.14
FOXG1P55316 HCG4P8-203ENST00000443049 980 ntBASIC15.91■□□□□ 0.14
FOXG1P55316 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 AC091607.1-201ENST00000490318 1060 ntBASIC15.91■□□□□ 0.14
FOXG1P55316 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
FOXG1P55316 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
FOXG1P55316 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
FOXG1P55316 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXG1P55316 AL592071.1-201ENST00000611956 408 ntBASIC15.91■□□□□ 0.14
FOXG1P55316 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
FOXG1P55316 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXG1P55316 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXG1P55316 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 AC093010.1-201ENST00000473625 1624 ntBASIC15.9■□□□□ 0.14
FOXG1P55316 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.9■□□□□ 0.14
FOXG1P55316 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.9■□□□□ 0.14
FOXG1P55316 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.9■□□□□ 0.14
FOXG1P55316 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXG1P55316 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
FOXG1P55316 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXG1P55316 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXG1P55316 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms