Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.75■□□□□ 0.59
AIF1P55008 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
AIF1P55008 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.75■□□□□ 0.59
AIF1P55008 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AIF1P55008 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AIF1P55008 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.75■□□□□ 0.59
AIF1P55008 LINC00602-201ENST00000629776 2065 ntBASIC18.75■□□□□ 0.59
AIF1P55008 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
AIF1P55008 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.74■□□□□ 0.59
AIF1P55008 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.74■□□□□ 0.59
AIF1P55008 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
AIF1P55008 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
AIF1P55008 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.74■□□□□ 0.59
AIF1P55008 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.74■□□□□ 0.59
AIF1P55008 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.74■□□□□ 0.59
AIF1P55008 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.74■□□□□ 0.59
AIF1P55008 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.74■□□□□ 0.59
AIF1P55008 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.74■□□□□ 0.59
AIF1P55008 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.74■□□□□ 0.59
AIF1P55008 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.74■□□□□ 0.59
AIF1P55008 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 KRT18P55-202ENST00000578578 1546 ntBASIC18.74■□□□□ 0.59
AIF1P55008 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AIF1P55008 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
AIF1P55008 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.73■□□□□ 0.59
AIF1P55008 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.73■□□□□ 0.59
AIF1P55008 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
AIF1P55008 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
AIF1P55008 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
AIF1P55008 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.73■□□□□ 0.59
AIF1P55008 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.73■□□□□ 0.59
AIF1P55008 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.73■□□□□ 0.59
AIF1P55008 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
AIF1P55008 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
AIF1P55008 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
AIF1P55008 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.73■□□□□ 0.59
AIF1P55008 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.73■□□□□ 0.59
AIF1P55008 AL031133.1-201ENST00000406807 723 ntBASIC18.73■□□□□ 0.59
AIF1P55008 AL645929.1-201ENST00000420084 975 ntBASIC18.73■□□□□ 0.59
AIF1P55008 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.73■□□□□ 0.59
AIF1P55008 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.73■□□□□ 0.59
AIF1P55008 AC004263.2-201ENST00000617183 678 ntBASIC18.73■□□□□ 0.59
AIF1P55008 AC009154.2-201ENST00000621177 724 ntBASIC18.73■□□□□ 0.59
AIF1P55008 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.73■□□□□ 0.59
AIF1P55008 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
AIF1P55008 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.73■□□□□ 0.59
AIF1P55008 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.73■□□□□ 0.59
AIF1P55008 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
AIF1P55008 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AIF1P55008 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.72■□□□□ 0.59
AIF1P55008 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.72■□□□□ 0.59
AIF1P55008 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
AIF1P55008 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.72■□□□□ 0.59
AIF1P55008 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.72■□□□□ 0.59
AIF1P55008 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.72■□□□□ 0.59
AIF1P55008 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
AIF1P55008 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.72■□□□□ 0.59
AIF1P55008 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.72■□□□□ 0.59
AIF1P55008 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
AIF1P55008 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.72■□□□□ 0.59
AIF1P55008 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AIF1P55008 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.72■□□□□ 0.59
AIF1P55008 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AIF1P55008 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AIF1P55008 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms