Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AC008550.1-201ENST00000511500 884 ntBASIC16.17■□□□□ 0.18
SLC25A1P53007 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SLC25A1P53007 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC25A1P53007 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SLC25A1P53007 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC25A1P53007 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC25A1P53007 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC25A1P53007 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC25A1P53007 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC25A1P53007 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC25A1P53007 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SLC25A1P53007 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 SIRPAP1-201ENST00000448467 1770 ntBASIC16.16■□□□□ 0.18
SLC25A1P53007 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC25A1P53007 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SLC25A1P53007 MIR1238-201ENST00000408483 83 ntBASIC16.16■□□□□ 0.18
SLC25A1P53007 AL390955.1-201ENST00000428694 934 ntBASIC16.16■□□□□ 0.18
SLC25A1P53007 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC25A1P53007 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC25A1P53007 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC25A1P53007 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC25A1P53007 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC25A1P53007 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC25A1P53007 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC25A1P53007 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC25A1P53007 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC25A1P53007 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC25A1P53007 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC25A1P53007 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC25A1P53007 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC25A1P53007 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC25A1P53007 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC25A1P53007 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC25A1P53007 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC25A1P53007 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC25A1P53007 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC25A1P53007 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC25A1P53007 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC25A1P53007 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC25A1P53007 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC25A1P53007 EGLN1P1-201ENST00000531623 762 ntBASIC16.15■□□□□ 0.18
SLC25A1P53007 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC25A1P53007 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC25A1P53007 AC008687.5-201ENST00000593746 558 ntBASIC16.15■□□□□ 0.18
SLC25A1P53007 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC25A1P53007 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC25A1P53007 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC25A1P53007 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC25A1P53007 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC25A1P53007 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC25A1P53007 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC25A1P53007 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC25A1P53007 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC25A1P53007 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC25A1P53007 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.14■□□□□ 0.18
SLC25A1P53007 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC25A1P53007 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC25A1P53007 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC25A1P53007 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC25A1P53007 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC25A1P53007 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC25A1P53007 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC25A1P53007 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC25A1P53007 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC25A1P53007 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC25A1P53007 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC25A1P53007 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC25A1P53007 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC25A1P53007 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC25A1P53007 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC25A1P53007 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC25A1P53007 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC25A1P53007 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms