Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.67■□□□□ 0.74
PDE6CP51160 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.67■□□□□ 0.74
PDE6CP51160 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.67■□□□□ 0.74
PDE6CP51160 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6CP51160 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6CP51160 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6CP51160 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PDE6CP51160 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6CP51160 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.67■□□□□ 0.74
PDE6CP51160 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6CP51160 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.66■□□□□ 0.74
PDE6CP51160 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.66■□□□□ 0.74
PDE6CP51160 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.66■□□□□ 0.74
PDE6CP51160 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PDE6CP51160 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.66■□□□□ 0.74
PDE6CP51160 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PDE6CP51160 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 AC018470.1-201ENST00000624790 3129 ntBASIC19.66■□□□□ 0.74
PDE6CP51160 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PDE6CP51160 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 AC034232.1-201ENST00000506026 1064 ntBASIC19.66■□□□□ 0.74
PDE6CP51160 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.66■□□□□ 0.74
PDE6CP51160 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.66■□□□□ 0.74
PDE6CP51160 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
PDE6CP51160 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.66■□□□□ 0.74
PDE6CP51160 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PDE6CP51160 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PDE6CP51160 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PDE6CP51160 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.66■□□□□ 0.74
PDE6CP51160 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PDE6CP51160 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE6CP51160 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.66■□□□□ 0.74
PDE6CP51160 AC020916.1-201ENST00000587762 1774 ntBASIC19.65■□□□□ 0.74
PDE6CP51160 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.65■□□□□ 0.74
PDE6CP51160 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PDE6CP51160 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDE6CP51160 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDE6CP51160 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.65■□□□□ 0.74
PDE6CP51160 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.65■□□□□ 0.74
PDE6CP51160 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.65■□□□□ 0.74
PDE6CP51160 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDE6CP51160 AC009065.1-201ENST00000564055 1225 ntBASIC19.65■□□□□ 0.74
PDE6CP51160 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE6CP51160 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.65■□□□□ 0.74
PDE6CP51160 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.65■□□□□ 0.74
PDE6CP51160 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PDE6CP51160 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.65■□□□□ 0.74
PDE6CP51160 AP000550.4-202ENST00000639755 178 ntBASIC19.65■□□□□ 0.74
PDE6CP51160 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PDE6CP51160 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PDE6CP51160 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE6CP51160 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDE6CP51160 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE6CP51160 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDE6CP51160 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.65■□□□□ 0.74
PDE6CP51160 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE6CP51160 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.64■□□□□ 0.74
PDE6CP51160 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.64■□□□□ 0.74
PDE6CP51160 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDE6CP51160 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.64■□□□□ 0.73
PDE6CP51160 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.64■□□□□ 0.73
PDE6CP51160 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.64■□□□□ 0.73
PDE6CP51160 AL358472.4-201ENST00000633140 710 ntBASIC19.64■□□□□ 0.73
PDE6CP51160 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.64■□□□□ 0.73
PDE6CP51160 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 SDHAP2-201ENST00000455183 2001 ntBASIC19.64■□□□□ 0.73
PDE6CP51160 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.64■□□□□ 0.73
PDE6CP51160 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PDE6CP51160 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PDE6CP51160 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
PDE6CP51160 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.64■□□□□ 0.73
PDE6CP51160 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6CP51160 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 PCDHB18P-201ENST00000524813 2368 ntBASIC19.63■□□□□ 0.73
PDE6CP51160 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.63■□□□□ 0.73
PDE6CP51160 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.63■□□□□ 0.73
PDE6CP51160 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PDE6CP51160 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms