Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RNF144AP50876 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF144AP50876 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF144AP50876 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF144AP50876 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF144AP50876 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF144AP50876 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF144AP50876 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.92■□□□□ 0.3
RNF144AP50876 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.92■□□□□ 0.3
RNF144AP50876 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF144AP50876 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RNF144AP50876 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
RNF144AP50876 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF144AP50876 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF144AP50876 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.92■□□□□ 0.3
RNF144AP50876 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF144AP50876 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RNF144AP50876 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF144AP50876 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF144AP50876 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF144AP50876 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF144AP50876 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 AC067852.2-201ENST00000590513 2313 ntBASIC16.91■□□□□ 0.3
RNF144AP50876 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF144AP50876 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF144AP50876 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF144AP50876 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF144AP50876 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RNF144AP50876 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF144AP50876 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF144AP50876 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RNF144AP50876 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RNF144AP50876 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 ATP5G1P1-201ENST00000448724 379 ntBASIC16.91■□□□□ 0.3
RNF144AP50876 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF144AP50876 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF144AP50876 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF144AP50876 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF144AP50876 LTB4R2-202ENST00000528054 3092 ntBASIC16.9■□□□□ 0.3
RNF144AP50876 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
RNF144AP50876 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF144AP50876 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF144AP50876 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.9■□□□□ 0.3
RNF144AP50876 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF144AP50876 AP000593.1-201ENST00000393668 712 ntBASIC16.9■□□□□ 0.3
RNF144AP50876 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RNF144AP50876 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF144AP50876 LIN28AP1-201ENST00000429574 405 ntBASIC16.9■□□□□ 0.3
RNF144AP50876 SEC1P-202ENST00000473944 940 ntBASIC16.9■□□□□ 0.3
RNF144AP50876 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF144AP50876 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF144AP50876 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 AC010240.3-201ENST00000607688 395 ntBASIC16.9■□□□□ 0.3
RNF144AP50876 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RNF144AP50876 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RNF144AP50876 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
RNF144AP50876 AC141257.4-201ENST00000634557 245 ntBASIC16.9■□□□□ 0.3
RNF144AP50876 AC136944.6-201ENST00000634818 245 ntBASIC16.9■□□□□ 0.3
RNF144AP50876 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms