Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KNTC1P50748 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KNTC1P50748 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KNTC1P50748 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.24■□□□□ 0.35
KNTC1P50748 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.24■□□□□ 0.35
KNTC1P50748 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KNTC1P50748 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.24■□□□□ 0.35
KNTC1P50748 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KNTC1P50748 MTCL1P1-201ENST00000446207 792 ntBASIC17.24■□□□□ 0.35
KNTC1P50748 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.24■□□□□ 0.35
KNTC1P50748 AC112482.1-201ENST00000492080 688 ntBASIC17.24■□□□□ 0.35
KNTC1P50748 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.24■□□□□ 0.35
KNTC1P50748 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.24■□□□□ 0.35
KNTC1P50748 AC040169.1-201ENST00000565382 521 ntBASIC17.24■□□□□ 0.35
KNTC1P50748 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.24■□□□□ 0.35
KNTC1P50748 AC083906.6-201ENST00000641366 219 ntBASIC17.24■□□□□ 0.35
KNTC1P50748 AC079781.4-201ENST00000641908 219 ntBASIC17.24■□□□□ 0.35
KNTC1P50748 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.24■□□□□ 0.35
KNTC1P50748 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.24■□□□□ 0.35
KNTC1P50748 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
KNTC1P50748 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.23■□□□□ 0.35
KNTC1P50748 AC002310.6-201ENST00000624451 1377 ntBASIC17.23■□□□□ 0.35
KNTC1P50748 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
KNTC1P50748 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.23■□□□□ 0.35
KNTC1P50748 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.23■□□□□ 0.35
KNTC1P50748 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.23■□□□□ 0.35
KNTC1P50748 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.23■□□□□ 0.35
KNTC1P50748 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.23■□□□□ 0.35
KNTC1P50748 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.23■□□□□ 0.35
KNTC1P50748 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.23■□□□□ 0.35
KNTC1P50748 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.23■□□□□ 0.35
KNTC1P50748 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.23■□□□□ 0.35
KNTC1P50748 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KNTC1P50748 AC009154.2-201ENST00000621177 724 ntBASIC17.23■□□□□ 0.35
KNTC1P50748 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.23■□□□□ 0.35
KNTC1P50748 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KNTC1P50748 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
KNTC1P50748 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KNTC1P50748 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KNTC1P50748 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
KNTC1P50748 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
KNTC1P50748 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.22■□□□□ 0.35
KNTC1P50748 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KNTC1P50748 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.22■□□□□ 0.35
KNTC1P50748 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KNTC1P50748 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.22■□□□□ 0.35
KNTC1P50748 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.22■□□□□ 0.35
KNTC1P50748 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.22■□□□□ 0.35
KNTC1P50748 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
KNTC1P50748 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.22■□□□□ 0.35
KNTC1P50748 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
KNTC1P50748 AC004817.3-201ENST00000602957 2129 ntBASIC17.22■□□□□ 0.35
KNTC1P50748 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KNTC1P50748 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KNTC1P50748 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
KNTC1P50748 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.22■□□□□ 0.35
KNTC1P50748 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KNTC1P50748 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.22■□□□□ 0.35
KNTC1P50748 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KNTC1P50748 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KNTC1P50748 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KNTC1P50748 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.21■□□□□ 0.35
KNTC1P50748 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KNTC1P50748 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.21■□□□□ 0.35
KNTC1P50748 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
KNTC1P50748 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.21■□□□□ 0.35
KNTC1P50748 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.21■□□□□ 0.35
KNTC1P50748 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.21■□□□□ 0.35
KNTC1P50748 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KNTC1P50748 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KNTC1P50748 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KNTC1P50748 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KNTC1P50748 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.21■□□□□ 0.35
KNTC1P50748 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.21■□□□□ 0.35
KNTC1P50748 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.21■□□□□ 0.35
KNTC1P50748 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
KNTC1P50748 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KNTC1P50748 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms