Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
SOX6P35712 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SOX6P35712 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SOX6P35712 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SOX6P35712 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.33■□□□□ 0.2
SOX6P35712 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SOX6P35712 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.33■□□□□ 0.2
SOX6P35712 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 RAP2CP1-201ENST00000605103 478 ntBASIC16.33■□□□□ 0.2
SOX6P35712 OR10C1-204ENST00000622521 1039 ntBASIC16.33■□□□□ 0.2
SOX6P35712 AC068587.9-201ENST00000641814 219 ntBASIC16.33■□□□□ 0.2
SOX6P35712 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.33■□□□□ 0.2
SOX6P35712 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 AC006116.8-202ENST00000587620 1550 ntBASIC16.33■□□□□ 0.2
SOX6P35712 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.33■□□□□ 0.2
SOX6P35712 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.33■□□□□ 0.2
SOX6P35712 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.33■□□□□ 0.2
SOX6P35712 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SOX6P35712 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SOX6P35712 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SOX6P35712 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX6P35712 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.32■□□□□ 0.2
SOX6P35712 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX6P35712 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SOX6P35712 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX6P35712 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX6P35712 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX6P35712 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.32■□□□□ 0.2
SOX6P35712 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX6P35712 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX6P35712 AL390719.1-204ENST00000412397 1219 ntBASIC16.32■□□□□ 0.2
SOX6P35712 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SOX6P35712 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX6P35712 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.32■□□□□ 0.2
SOX6P35712 AC090192.1-201ENST00000517740 490 ntBASIC16.32■□□□□ 0.2
SOX6P35712 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
SOX6P35712 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.32■□□□□ 0.2
SOX6P35712 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.32■□□□□ 0.2
SOX6P35712 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX6P35712 AC124283.5-201ENST00000624661 1809 ntBASIC16.32■□□□□ 0.2
SOX6P35712 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SOX6P35712 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.32■□□□□ 0.2
SOX6P35712 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX6P35712 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
SOX6P35712 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SOX6P35712 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.31■□□□□ 0.2
SOX6P35712 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SOX6P35712 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SOX6P35712 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.31■□□□□ 0.2
SOX6P35712 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SOX6P35712 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SOX6P35712 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.31■□□□□ 0.2
SOX6P35712 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.31■□□□□ 0.2
SOX6P35712 CROCCP5-201ENST00000436658 830 ntBASIC16.31■□□□□ 0.2
SOX6P35712 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.31■□□□□ 0.2
SOX6P35712 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SOX6P35712 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.31■□□□□ 0.2
SOX6P35712 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.31■□□□□ 0.2
SOX6P35712 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.31■□□□□ 0.2
SOX6P35712 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SOX6P35712 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
SOX6P35712 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
SOX6P35712 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX6P35712 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.3■□□□□ 0.2
SOX6P35712 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.3■□□□□ 0.2
SOX6P35712 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SOX6P35712 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX6P35712 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms