Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCK1P35558 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.17■□□□□ 0.66
PCK1P35558 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCK1P35558 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCK1P35558 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.16■□□□□ 0.66
PCK1P35558 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCK1P35558 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCK1P35558 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 ECEL1P3-201ENST00000427961 737 ntBASIC19.16■□□□□ 0.66
PCK1P35558 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.16■□□□□ 0.66
PCK1P35558 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.16■□□□□ 0.66
PCK1P35558 SEC1P-202ENST00000473944 940 ntBASIC19.16■□□□□ 0.66
PCK1P35558 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.16■□□□□ 0.66
PCK1P35558 AC010240.3-201ENST00000607688 395 ntBASIC19.16■□□□□ 0.66
PCK1P35558 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.16■□□□□ 0.66
PCK1P35558 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.16■□□□□ 0.66
PCK1P35558 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCK1P35558 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.16■□□□□ 0.66
PCK1P35558 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
PCK1P35558 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.16■□□□□ 0.66
PCK1P35558 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCK1P35558 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
PCK1P35558 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.16■□□□□ 0.66
PCK1P35558 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCK1P35558 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCK1P35558 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.15■□□□□ 0.66
PCK1P35558 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCK1P35558 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
PCK1P35558 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.15■□□□□ 0.66
PCK1P35558 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.15■□□□□ 0.66
PCK1P35558 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.15■□□□□ 0.66
PCK1P35558 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.15■□□□□ 0.66
PCK1P35558 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.15■□□□□ 0.66
PCK1P35558 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCK1P35558 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCK1P35558 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCK1P35558 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
PCK1P35558 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCK1P35558 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCK1P35558 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
PCK1P35558 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCK1P35558 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCK1P35558 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.15■□□□□ 0.66
PCK1P35558 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.15■□□□□ 0.66
PCK1P35558 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCK1P35558 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.15■□□□□ 0.66
PCK1P35558 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PCK1P35558 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PCK1P35558 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.14■□□□□ 0.66
PCK1P35558 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCK1P35558 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCK1P35558 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCK1P35558 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
PCK1P35558 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCK1P35558 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.14■□□□□ 0.65
PCK1P35558 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.14■□□□□ 0.65
PCK1P35558 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCK1P35558 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.14■□□□□ 0.65
PCK1P35558 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.14■□□□□ 0.65
PCK1P35558 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.14■□□□□ 0.65
PCK1P35558 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.14■□□□□ 0.65
PCK1P35558 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCK1P35558 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCK1P35558 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCK1P35558 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.14■□□□□ 0.65
PCK1P35558 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCK1P35558 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PCK1P35558 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCK1P35558 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCK1P35558 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.14■□□□□ 0.65
PCK1P35558 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PCK1P35558 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCK1P35558 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.14■□□□□ 0.65
PCK1P35558 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.14■□□□□ 0.65
PCK1P35558 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCK1P35558 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.13■□□□□ 0.65
PCK1P35558 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCK1P35558 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCK1P35558 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCK1P35558 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.13■□□□□ 0.65
PCK1P35558 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCK1P35558 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCK1P35558 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCK1P35558 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms