Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC020763.4-201ENST00000623414 4170 ntBASIC17.27■□□□□ 0.36
PTPN6P29350 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN6P29350 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN6P29350 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PTPN6P29350 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN6P29350 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN6P29350 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN6P29350 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN6P29350 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN6P29350 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN6P29350 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
PTPN6P29350 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PTPN6P29350 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN6P29350 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPN6P29350 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PTPN6P29350 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
PTPN6P29350 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PTPN6P29350 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PTPN6P29350 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN6P29350 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN6P29350 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 TERF1P1-201ENST00000311003 1181 ntBASIC17.26■□□□□ 0.35
PTPN6P29350 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN6P29350 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTPN6P29350 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 HMGA1P5-201ENST00000412453 271 ntBASIC17.26■□□□□ 0.35
PTPN6P29350 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 AL137013.1-201ENST00000432946 1228 ntBASIC17.26■□□□□ 0.35
PTPN6P29350 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPN6P29350 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN6P29350 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPN6P29350 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PTPN6P29350 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN6P29350 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPN6P29350 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN6P29350 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN6P29350 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN6P29350 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PTPN6P29350 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 LINC01126-201ENST00000623515 1646 ntBASIC17.25■□□□□ 0.35
PTPN6P29350 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
PTPN6P29350 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN6P29350 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN6P29350 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 AC073508.3-201ENST00000619697 1419 ntBASIC17.25■□□□□ 0.35
PTPN6P29350 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTPN6P29350 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPN6P29350 AC010203.1-204ENST00000548782 407 ntBASIC17.25■□□□□ 0.35
PTPN6P29350 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTPN6P29350 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.25■□□□□ 0.35
PTPN6P29350 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN6P29350 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN6P29350 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTPN6P29350 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN6P29350 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN6P29350 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PTPN6P29350 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN6P29350 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPN6P29350 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN6P29350 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN6P29350 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTPN6P29350 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN6P29350 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PTPN6P29350 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN6P29350 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN6P29350 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPN6P29350 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms