Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 DUSP5P1-201ENST00000441325 1139 ntBASIC16.48■□□□□ 0.23
GDF1P27539 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.48■□□□□ 0.23
GDF1P27539 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.48■□□□□ 0.23
GDF1P27539 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.48■□□□□ 0.23
GDF1P27539 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.48■□□□□ 0.23
GDF1P27539 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GDF1P27539 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.48■□□□□ 0.23
GDF1P27539 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.48■□□□□ 0.23
GDF1P27539 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.48■□□□□ 0.23
GDF1P27539 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
GDF1P27539 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.48■□□□□ 0.23
GDF1P27539 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GDF1P27539 LINC01126-201ENST00000623515 1646 ntBASIC16.48■□□□□ 0.23
GDF1P27539 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.48■□□□□ 0.23
GDF1P27539 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GDF1P27539 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.47■□□□□ 0.23
GDF1P27539 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
GDF1P27539 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GDF1P27539 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.47■□□□□ 0.23
GDF1P27539 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
GDF1P27539 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
GDF1P27539 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.47■□□□□ 0.23
GDF1P27539 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.47■□□□□ 0.23
GDF1P27539 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.47■□□□□ 0.23
GDF1P27539 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.47■□□□□ 0.23
GDF1P27539 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
GDF1P27539 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GDF1P27539 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.46■□□□□ 0.23
GDF1P27539 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
GDF1P27539 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
GDF1P27539 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.46■□□□□ 0.23
GDF1P27539 AC104819.1-201ENST00000504587 486 ntBASIC16.46■□□□□ 0.23
GDF1P27539 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 KRT126P-201ENST00000549467 1181 ntBASIC16.46■□□□□ 0.23
GDF1P27539 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.46■□□□□ 0.23
GDF1P27539 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.46■□□□□ 0.23
GDF1P27539 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 Z69720.1-201ENST00000601483 472 ntBASIC16.46■□□□□ 0.23
GDF1P27539 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 TNXA-203ENST00000507684 2038 ntBASIC16.46■□□□□ 0.23
GDF1P27539 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.46■□□□□ 0.23
GDF1P27539 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.46■□□□□ 0.23
GDF1P27539 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
GDF1P27539 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDF1P27539 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GDF1P27539 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GDF1P27539 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
GDF1P27539 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
GDF1P27539 LINC00602-201ENST00000629776 2065 ntBASIC16.46■□□□□ 0.22
GDF1P27539 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 LINC00167-201ENST00000530583 1419 ntBASIC16.45■□□□□ 0.22
GDF1P27539 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
GDF1P27539 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
GDF1P27539 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.45■□□□□ 0.22
GDF1P27539 AC074051.2-201ENST00000565115 352 ntBASIC16.45■□□□□ 0.22
GDF1P27539 AC012615.1-201ENST00000565797 1299 ntBASIC16.45■□□□□ 0.22
GDF1P27539 AC011840.4-201ENST00000578471 627 ntBASIC16.45■□□□□ 0.22
GDF1P27539 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.45■□□□□ 0.22
GDF1P27539 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms