Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.73■□□□□ 0.43
LAMA1P25391 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.73■□□□□ 0.43
LAMA1P25391 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.73■□□□□ 0.43
LAMA1P25391 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.73■□□□□ 0.43
LAMA1P25391 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMA1P25391 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LAMA1P25391 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LAMA1P25391 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LAMA1P25391 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LAMA1P25391 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LAMA1P25391 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LAMA1P25391 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.72■□□□□ 0.43
LAMA1P25391 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.72■□□□□ 0.43
LAMA1P25391 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.72■□□□□ 0.43
LAMA1P25391 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LAMA1P25391 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
LAMA1P25391 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.72■□□□□ 0.43
LAMA1P25391 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
LAMA1P25391 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.72■□□□□ 0.43
LAMA1P25391 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.72■□□□□ 0.43
LAMA1P25391 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LAMA1P25391 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.72■□□□□ 0.43
LAMA1P25391 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.72■□□□□ 0.43
LAMA1P25391 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.72■□□□□ 0.43
LAMA1P25391 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.72■□□□□ 0.43
LAMA1P25391 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.72■□□□□ 0.43
LAMA1P25391 AC083906.6-201ENST00000641366 219 ntBASIC17.72■□□□□ 0.43
LAMA1P25391 AC079781.4-201ENST00000641908 219 ntBASIC17.72■□□□□ 0.43
LAMA1P25391 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LAMA1P25391 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.72■□□□□ 0.43
LAMA1P25391 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LAMA1P25391 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LAMA1P25391 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.72■□□□□ 0.43
LAMA1P25391 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.72■□□□□ 0.43
LAMA1P25391 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.71■□□□□ 0.43
LAMA1P25391 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 PMPCAP1-201ENST00000508114 1576 ntBASIC17.71■□□□□ 0.43
LAMA1P25391 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.71■□□□□ 0.43
LAMA1P25391 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.71■□□□□ 0.43
LAMA1P25391 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.71■□□□□ 0.43
LAMA1P25391 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.71■□□□□ 0.43
LAMA1P25391 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.71■□□□□ 0.43
LAMA1P25391 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.71■□□□□ 0.43
LAMA1P25391 AC107918.4-202ENST00000641623 219 ntBASIC17.71■□□□□ 0.43
LAMA1P25391 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.71■□□□□ 0.43
LAMA1P25391 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LAMA1P25391 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.71■□□□□ 0.42
LAMA1P25391 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.71■□□□□ 0.42
LAMA1P25391 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
LAMA1P25391 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LAMA1P25391 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.7■□□□□ 0.42
LAMA1P25391 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.7■□□□□ 0.42
LAMA1P25391 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.7■□□□□ 0.42
LAMA1P25391 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.7■□□□□ 0.42
LAMA1P25391 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 AP002414.3-201ENST00000589352 1468 ntBASIC17.7■□□□□ 0.42
LAMA1P25391 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LAMA1P25391 AC009947.1-201ENST00000444350 727 ntBASIC17.7■□□□□ 0.42
LAMA1P25391 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.7■□□□□ 0.42
LAMA1P25391 AL139288.1-201ENST00000623748 933 ntBASIC17.7■□□□□ 0.42
LAMA1P25391 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LAMA1P25391 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.7■□□□□ 0.42
LAMA1P25391 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.7■□□□□ 0.42
LAMA1P25391 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.7■□□□□ 0.42
LAMA1P25391 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LAMA1P25391 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
LAMA1P25391 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LAMA1P25391 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LAMA1P25391 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LAMA1P25391 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LAMA1P25391 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LAMA1P25391 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LAMA1P25391 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.69■□□□□ 0.42
LAMA1P25391 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.69■□□□□ 0.42
LAMA1P25391 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.69■□□□□ 0.42
LAMA1P25391 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.69■□□□□ 0.42
LAMA1P25391 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms