Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.13■□□□□ 0.65
MMP8P22894 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.13■□□□□ 0.65
MMP8P22894 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.13■□□□□ 0.65
MMP8P22894 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
MMP8P22894 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
MMP8P22894 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.13■□□□□ 0.65
MMP8P22894 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MMP8P22894 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
MMP8P22894 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.12■□□□□ 0.65
MMP8P22894 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.12■□□□□ 0.65
MMP8P22894 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.12■□□□□ 0.65
MMP8P22894 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 KRT18P55-202ENST00000578578 1546 ntBASIC19.12■□□□□ 0.65
MMP8P22894 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 RCN1P1-201ENST00000400413 996 ntBASIC19.12■□□□□ 0.65
MMP8P22894 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
MMP8P22894 AK4P3-201ENST00000418260 669 ntBASIC19.12■□□□□ 0.65
MMP8P22894 KRT18P38-201ENST00000449496 1282 ntBASIC19.12■□□□□ 0.65
MMP8P22894 HOMER2P1-201ENST00000455653 964 ntBASIC19.12■□□□□ 0.65
MMP8P22894 AC092597.1-201ENST00000487352 616 ntBASIC19.12■□□□□ 0.65
MMP8P22894 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.12■□□□□ 0.65
MMP8P22894 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.12■□□□□ 0.65
MMP8P22894 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.12■□□□□ 0.65
MMP8P22894 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.12■□□□□ 0.65
MMP8P22894 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.12■□□□□ 0.65
MMP8P22894 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
MMP8P22894 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
MMP8P22894 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP8P22894 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MMP8P22894 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
MMP8P22894 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MMP8P22894 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MMP8P22894 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MMP8P22894 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP8P22894 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP8P22894 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP8P22894 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP8P22894 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
MMP8P22894 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP8P22894 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MMP8P22894 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP8P22894 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
MMP8P22894 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP8P22894 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 LINC00602-201ENST00000629776 2065 ntBASIC19.1■□□□□ 0.65
MMP8P22894 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms