Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
NCLP19338 AC011270.2-201ENST00000624293 2550 ntBASIC21.64■■□□□ 1.06
NCLP19338 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.64■■□□□ 1.06
NCLP19338 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NCLP19338 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NCLP19338 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
NCLP19338 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NCLP19338 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NCLP19338 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.64■■□□□ 1.05
NCLP19338 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 Z85996.1-201ENST00000494644 937 ntBASIC21.64■■□□□ 1.05
NCLP19338 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.64■■□□□ 1.05
NCLP19338 MYC-208ENST00000641036 567 ntBASIC21.64■■□□□ 1.05
NCLP19338 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.64■■□□□ 1.05
NCLP19338 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
NCLP19338 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.64■■□□□ 1.05
NCLP19338 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLP19338 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC21.63■■□□□ 1.05
NCLP19338 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.63■■□□□ 1.05
NCLP19338 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.63■■□□□ 1.05
NCLP19338 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.63■■□□□ 1.05
NCLP19338 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
NCLP19338 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.63■■□□□ 1.05
NCLP19338 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.63■■□□□ 1.05
NCLP19338 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.63■■□□□ 1.05
NCLP19338 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NCLP19338 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.63■■□□□ 1.05
NCLP19338 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCLP19338 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.63■■□□□ 1.05
NCLP19338 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NCLP19338 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 KRT17P2-201ENST00000300992 1314 ntBASIC21.62■■□□□ 1.05
NCLP19338 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
NCLP19338 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.62■■□□□ 1.05
NCLP19338 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NCLP19338 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
NCLP19338 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.62■■□□□ 1.05
NCLP19338 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.62■■□□□ 1.05
NCLP19338 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.62■■□□□ 1.05
NCLP19338 AC068587.9-201ENST00000641814 219 ntBASIC21.62■■□□□ 1.05
NCLP19338 PRORSD1P-202ENST00000563365 2154 ntBASIC21.62■■□□□ 1.05
NCLP19338 AL356309.3-201ENST00000624132 1934 ntBASIC21.62■■□□□ 1.05
NCLP19338 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.62■■□□□ 1.05
NCLP19338 KRT8P11-201ENST00000409686 1436 ntBASIC21.62■■□□□ 1.05
NCLP19338 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NCLP19338 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
NCLP19338 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLP19338 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 PCDHA12-202ENST00000613593 2588 ntBASIC21.61■■□□□ 1.05
NCLP19338 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 HTR7P1-201ENST00000538670 1336 ntBASIC21.61■■□□□ 1.05
NCLP19338 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.61■■□□□ 1.05
NCLP19338 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.61■■□□□ 1.05
NCLP19338 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NCLP19338 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NCLP19338 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms