Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.22■□□□□ 0.35
NCK1P16333 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.22■□□□□ 0.35
NCK1P16333 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NCK1P16333 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 MIR564-202ENST00000385049 94 ntBASIC17.22■□□□□ 0.35
NCK1P16333 AP000593.1-201ENST00000393668 712 ntBASIC17.22■□□□□ 0.35
NCK1P16333 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
NCK1P16333 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.22■□□□□ 0.35
NCK1P16333 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
NCK1P16333 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.22■□□□□ 0.35
NCK1P16333 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NCK1P16333 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
NCK1P16333 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.21■□□□□ 0.35
NCK1P16333 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.21■□□□□ 0.35
NCK1P16333 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.21■□□□□ 0.35
NCK1P16333 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NCK1P16333 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.21■□□□□ 0.35
NCK1P16333 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.21■□□□□ 0.35
NCK1P16333 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.21■□□□□ 0.35
NCK1P16333 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NCK1P16333 AP002982.1-201ENST00000492365 877 ntBASIC17.21■□□□□ 0.35
NCK1P16333 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.21■□□□□ 0.35
NCK1P16333 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.21■□□□□ 0.35
NCK1P16333 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NCK1P16333 AC104771.1-201ENST00000603335 964 ntBASIC17.21■□□□□ 0.35
NCK1P16333 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NCK1P16333 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NCK1P16333 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.21■□□□□ 0.35
NCK1P16333 TNRC18P3-201ENST00000441896 2691 ntBASIC17.21■□□□□ 0.35
NCK1P16333 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
NCK1P16333 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCK1P16333 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NCK1P16333 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NCK1P16333 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
NCK1P16333 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.21■□□□□ 0.34
NCK1P16333 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NCK1P16333 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.2■□□□□ 0.34
NCK1P16333 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.2■□□□□ 0.34
NCK1P16333 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.2■□□□□ 0.34
NCK1P16333 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.2■□□□□ 0.34
NCK1P16333 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
NCK1P16333 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
NCK1P16333 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.2■□□□□ 0.34
NCK1P16333 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.2■□□□□ 0.34
NCK1P16333 AC124016.1-201ENST00000609552 612 ntBASIC17.2■□□□□ 0.34
NCK1P16333 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
NCK1P16333 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NCK1P16333 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NCK1P16333 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NCK1P16333 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.2■□□□□ 0.34
NCK1P16333 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NCK1P16333 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms