Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL11A2P13942 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL11A2P13942 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL11A2P13942 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22.14■■□□□ 1.13
COL11A2P13942 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
COL11A2P13942 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.14■■□□□ 1.13
COL11A2P13942 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.14■■□□□ 1.13
COL11A2P13942 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.14■■□□□ 1.13
COL11A2P13942 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.14■■□□□ 1.13
COL11A2P13942 AC079781.4-201ENST00000641908 219 ntBASIC22.14■■□□□ 1.13
COL11A2P13942 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL11A2P13942 PCDHAC2-203ENST00000615316 3011 ntBASIC22.13■■□□□ 1.13
COL11A2P13942 AC007952.6-201ENST00000573168 2673 ntBASIC22.13■■□□□ 1.13
COL11A2P13942 AC003957.1-201ENST00000625108 2673 ntBASIC22.13■■□□□ 1.13
COL11A2P13942 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL11A2P13942 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL11A2P13942 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL11A2P13942 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL11A2P13942 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.13■■□□□ 1.13
COL11A2P13942 KLF4P1-201ENST00000412782 1185 ntBASIC22.13■■□□□ 1.13
COL11A2P13942 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.13■■□□□ 1.13
COL11A2P13942 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.13■■□□□ 1.13
COL11A2P13942 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL11A2P13942 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC22.13■■□□□ 1.13
COL11A2P13942 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
COL11A2P13942 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.13■■□□□ 1.13
COL11A2P13942 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL11A2P13942 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.13■■□□□ 1.13
COL11A2P13942 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.13■■□□□ 1.13
COL11A2P13942 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL11A2P13942 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL11A2P13942 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL11A2P13942 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
COL11A2P13942 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
COL11A2P13942 SPDYE21P-201ENST00000413323 827 ntBASIC22.12■■□□□ 1.13
COL11A2P13942 AC096633.1-201ENST00000422446 749 ntBASIC22.12■■□□□ 1.13
COL11A2P13942 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.12■■□□□ 1.13
COL11A2P13942 CFL1-212ENST00000531413 636 ntTSL 3 BASIC22.12■■□□□ 1.13
COL11A2P13942 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC22.12■■□□□ 1.13
COL11A2P13942 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.12■■□□□ 1.13
COL11A2P13942 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL11A2P13942 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.12■■□□□ 1.13
COL11A2P13942 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL11A2P13942 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL11A2P13942 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL11A2P13942 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL11A2P13942 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL11A2P13942 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.12■■□□□ 1.13
COL11A2P13942 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL11A2P13942 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
COL11A2P13942 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL11A2P13942 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL11A2P13942 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL11A2P13942 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.11■■□□□ 1.13
COL11A2P13942 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC22.11■■□□□ 1.13
COL11A2P13942 PGM5P2-202ENST00000637225 1043 ntBASIC22.11■■□□□ 1.13
COL11A2P13942 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL11A2P13942 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.11■■□□□ 1.13
COL11A2P13942 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
COL11A2P13942 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL11A2P13942 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
COL11A2P13942 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.11■■□□□ 1.13
COL11A2P13942 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
COL11A2P13942 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.11■■□□□ 1.13
COL11A2P13942 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.11■■□□□ 1.13
COL11A2P13942 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.11■■□□□ 1.13
COL11A2P13942 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC22.11■■□□□ 1.13
COL11A2P13942 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.11■■□□□ 1.13
COL11A2P13942 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC22.11■■□□□ 1.13
COL11A2P13942 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL11A2P13942 PUS1-205ENST00000535067 838 ntTSL 3 BASIC22.11■■□□□ 1.13
COL11A2P13942 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC22.11■■□□□ 1.13
COL11A2P13942 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
COL11A2P13942 MIR4469-201ENST00000583919 79 ntBASIC22.11■■□□□ 1.13
COL11A2P13942 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL11A2P13942 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.11■■□□□ 1.13
COL11A2P13942 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC22.11■■□□□ 1.13
COL11A2P13942 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL11A2P13942 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
COL11A2P13942 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL11A2P13942 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL11A2P13942 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL11A2P13942 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL11A2P13942 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.1■■□□□ 1.13
COL11A2P13942 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL11A2P13942 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
COL11A2P13942 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC22.1■■□□□ 1.13
COL11A2P13942 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
COL11A2P13942 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.1■■□□□ 1.13
COL11A2P13942 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL11A2P13942 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.1■■□□□ 1.13
COL11A2P13942 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
COL11A2P13942 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.1■■□□□ 1.13
COL11A2P13942 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
COL11A2P13942 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.09■■□□□ 1.13
COL11A2P13942 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL11A2P13942 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.09■■□□□ 1.13
COL11A2P13942 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
COL11A2P13942 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
COL11A2P13942 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms